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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885448.1_cds_XP_016439431.1_34985
CDS Infomation

[gene=LOC107765319] [db_xref=GeneID:107765319] [protein=proline--tRNA ligase, cytoplasmic-like] [protein_id=XP_016439431.1] [location=complement(join(42179..42243,42415..42508,43340..43558,43722..44006,44099..44251,44339..44461,45930..46175))] [gbkey=CDS]
Sequence

ATGTTCAAATCTAGCCTCTTTGAGATACCAGAGTTCATCGATGAAGAACCAATTTCACAT
GCAGTGCCTCCGATAGTAGCTGGATCTACATTGGGGATGGATGTTGGTGTAGTTATCTCT
TGCGTCAATTTCTCCATCGGTCATTGGTTACGAGTTACCACCGAGCTTACAAAGTTAGCT
AGGGGTTGCGTCTTAGGTCGGCCGCGTCCTCTACCTCTCCCTTTCGCCATGGCTGACACA
GGCGTCGTTCTTGAAATCTTGGAGTTATATAGACATATATATGAAGAATTCTTAGCTGTT
CCAGTGAGTAAGGGAAAGAAAAGCGAGCTTGAGAAGTTTGCTGGTGGACTCTATACGACT
ACAGTAGAGGCTTTTATCCCTAATACTGGCCGTGGTATCCAAGGTGCGACTTCACACTGT
TTGGGCCAGAATTTTGCAAAAATGTTTGAGATAAATTTTGAAAATGAGAAGGGAGAGAAG
GCTATGGTCTGGCAGAATTGCTGGGGCTTTACAACCAGAACGATTGGTGTGATGATCATG
GTTCATGGAGATGATAAAGGCCTGGTCTTACCTCCTAAAGTTGCAGCAACACAAGTAATT
CTTATTCCCGTGACATACAAGGATGCTAATACTCAAGGGATCTTTGACGCCTGTGCTGCC
ACTGTCAAAAACTTGAAGGAATCAGGTATTCGTGCTGAGGCAGATTACAGAGACAACTAC
TCACCTGGCTGGAAATATTCTCACTGGGAAATGAAGGGGGTTCCTCTTAGGATTGAAATA
GGACCAAAAGATCTTGCAAATAATCAGGTACGAGCTGTTCGACGTGACAATGGAGCCAAA
ACTGATATTCCTGTGGCAAATTTAGTCGAAGAAGTAAACAATGTGCTTGCCTCTATCCAA
CAAAATCTATTTGATGTCGCAAAACAAAAGCGGGATGCTTGTGTTCAGGTTGTAAAGACC
TGGGATGAATTTGCTGAAGCAATAAGCCAAAAGAAATTGATCTTGGCTCCTTGGTGTGAT
GAGGAGGATGTCGAGAAAGACGTGAAGGCACGGACAAAAGGGGAGATGGGTGCAGCGAAG
ACTCTCTGTTCACCATTTGACCAGCCTGAGCTGCCTGAAGGTACATTGTGCTTTGCCTCG
GGTAAACCTGCTAAGAAATGGACATACTGGGGCCGCAGCTATTGA

Peptide Sequence

PEP ID

XP_016439431.1
PEP Infomation

PREDICTED: proline--tRNA ligase, cytoplasmic-like [Nicotiana tabacum]
Sequence

MFKSSLFEIPEFIDEEPISHAVPPIVAGSTLGMDVGVVISCVNFSIGHWLRVTTELTKLA
RGCVLGRPRPLPLPFAMADTGVVLEILELYRHIYEEFLAVPVSKGKKSELEKFAGGLYTT
TVEAFIPNTGRGIQGATSHCLGQNFAKMFEINFENEKGEKAMVWQNCWGFTTRTIGVMIM
VHGDDKGLVLPPKVAATQVILIPVTYKDANTQGIFDACAATVKNLKESGIRAEADYRDNY
SPGWKYSHWEMKGVPLRIEIGPKDLANNQVRAVRRDNGAKTDIPVANLVEEVNNVLASIQ
QNLFDVAKQKRDACVQVVKTWDEFAEAISQKKLILAPWCDEEDVEKDVKARTKGEMGAAK
TLCSPFDQPELPEGTLCFASGKPAKKWTYWGRSY

Transcript Sequence

Gene sequence data has not been registered.